Table 3. SNP set enrichment analysis of BP coexpression modules and BP signature gene set
ModuleSBP GWASDBP GWAS
KS PPermutation‐based KS PaFisher PPermutation‐based Fisher PaKS PPermutation‐based KS PFisher PPermutation‐based Fisher Pa
BP signature0.980.96110.200.2311
Turquoise2.8e‐45< 0.0017.8e‐115< 0.0011.8e‐28< 0.0013.0e‐39< 0.001
Blue1.4e‐44< 0.0017.0e‐54< 0.0011.3e‐8< 0.0013.4e‐15< 0.001
Red8.0e‐5< 0.0011.7e‐17< 0.0012.2e‐15< 0.0016.7e‐19< 0.001
Purple0.650.710.580.611111
Lightyellow1.6e‐30.004110.120.1611
Chocolate2.3e‐14< 0.0015.0e‐5< 0.0010.070.0611
  • a Permutation‐based P is empirically derived based on 1,000 permutations (see Materials and Methods). < 0.001 indicates none of the 1,000 random gene sets of matching size had P‐values lower than the observed test P‐values.